論文題目	刊物名稱	發表年度
Stamatoyannopoulos Widespread plasticity in CTCF occupancy linked to DNA methylation	Genome Research	2012
Stamatoyannopoulos The accessible chromatin landscape of the human genome	Nature	2012
Stamatoyannopoulos Systematic localization of common disease-associated variation in regulatory DNA	Science	2012
An integrated encyclopedia of DNA elements in the human genome	Nature	2012
Stress hematopoiesis reveals abnormal control of self-renewal, lineage bias, and myeloid differentiation in Mll partial tandem duplication (Mll-PTD) hematopoietic stem/progenitor cells	Blood, 2012 120: 1118-1129	2012
Down-regulation of energy metabolism in Alzheimer’s disease is a protective response of neurons to the microenvironmenty metabolism in	Journal of Alzheimer’s Disease 28 (2012) 389–402	2012
The Bryopsis hypnoides plastid genome: multimeric forms and complete nucleotide sequence	PLoS One. 2011. Feb 14;6(2):e14663	2011
A Comparative Transcriptomic Analysis of Uveal Melanoma and Normal Uveal Melanocyte	PLoS ONE 2011,6(1): e16516	2011
On the Origin of Tibetans and their Genetic Basis in Adapting High-Altitude Environments	PLoS One .2011,6(2): e17002	2011
Both size and GC-content of minimal introns are selected in human population	PLoS One .2011,6: e17945	2011
The Disequilibrium of Nucleosomes Distribution along Chromosomes Plays a Functional and Evolutionarily Role in Regulating Gene Expression	PLoS One.2011, 6(8): e23219. doi:10.1371/journal.pone.0023219	2011
An Integrated Analysis of miRNA and mRNA Expressions in Non-small Cell Lung Cancers	PLoS One 2011 6(10): e26502. doi:10.1371/journal.pone.0026502	2011
Activation of HIF1a by the Prolylhydroxylase Inhibitor Dimethyoxalyglycine Decreases Radiosensitivity	PLoS ONE 2011, 6(10): e26064. (IF: 4.411)	2011
Genomic analysis of the multidrug-resistant Acinetobacter baumannii strain MDR-ZJ06 widely spread in China	ANTIMICROBIAL AGENTS AND CHEMOTHERAPY. 2011 Oct;55(10):4506-12	2011
PGAP: Pan-Genomes Analysis Pipeline. Bioinformatics	Bioinformatics (2012) 28 (3): 416-418.	2012
Identification and validation of rice reference proteins for Western blotting		2011
BAG2 is a target of the c-Myc gene and is involved in cellular senescence via the p21CIP1 pathway	Cancer Letters 318 (2012) 34–41	2011
wapRNA: a web-based application for the processing of RNA sequences	Bioinformatics. 2011 Nov 1;27(21):3076-7	2011
Oxidation of the cysteine-rich regions of parkin perturbs its E3 ligase activity and contributes to protein aggregation	Molecular Neurodegeneration 2011,6,34	2011
Evaluation of p38 MAPK pathway as a molecular signature in ulcerative colitis	J Proteome Res. 2011,10, 2216–2225	2011